BOOKS, SELECTED PUBLICATIONS AND BOOK CHAPTERS

For reprint requests, please contact Dr. Raphael Pinaud directly at pinaud@bcs.rochester.edu

BOOKS

Pinaud, R, Tremere, LA & De Weerd, P (Eds.) Plasticity in the Visual System: From Genes to Circuits. Springer-Verlag, New York (2005). ISBN: 0-387-28189-4.

Pinaud, R & Tremere, LA (Eds.) Immediate Early Genes in Sensory Processing, Cognitive Performance and Neurological Disorders. Springer-Verlag, New York (2006). ISBN: 0-387-33603-6.

SELECTED PEER-REVIEWED PUBLICATIONS

Tremere, LA, Terleph, TA, Jeong, JK & Pinaud, R* (2010) Bilateral multi-electrode neurophysiological recordings coupled to local pharmacology in awake songbirds. Nature Protoc . 5: 191-200. *Corresponding author.

Pinaud, R* (2010) Genome of a songbird unveiled. J. Biol . 9: 18-20. *Corresponding author.

Jeong, JK, Chen, Z, Tremere, LA & Pinaud, R* (2010) Double fluorescence in-situ hybridization in fresh brain sections. J. Vis. Exp. (in press). *Corresponding author.

Pinaud, R* & Jeong, JK (2010) Duplex in-situ hybridization in the study of gene co-regulation in the vertebrate brain. Methods Mol. Biol. 611: 115-129. *Corresponding author.

Tremere, LA, Jeong, JK & Pinaud, R* (2009) Estradiol shapes auditory processing in the adult brain by regulating inhibitory transmission and plasticity-associated gene expression. J. Neurosci. 29: 5949-5963. *Corresponding author.

Jeong, JK, Tremere, LA, Ryave, MJ, Vuong, VC & Pinaud, R* (2009) Anatomical and functional organization of inhibitory circuits in the songbird auditory forebrain. J. Exp. Neurosci. 2: 43-53. *Corresponding author.

Tremere, LA* & Pinaud, R* (2009) mGluR5 is a central regulator of synaptic function and plasticity in the developing mouse barrel cortex. J. Biosci . 34: 161-162. Cover Photo. *Corresponding authors.

Pinaud, R*, Mello, CV, Velho, TA, Wynne, RD & Tremere, LA (2008) Detection of two mRNA species at single-cell resolution by double-fluorescence in situ hybridization. Nature Protoc. 3: 1370-1379 . *Corresponding author.

Pinaud, R*, Terleph, TA, Tremere, LA, Phan, ML, Dagostin, AA, Leao, RM, Mello, CV & Vicario, DS (2008) Inhibitory network interactions shape the auditory processing of natural communication signals in the songbird auditory forebrain. J. Neurophysiol. 100: 441-455 . *Corresponding author.

Pinaud, R*, Osorio, C, Alzate, O & Jarvis, ED (2008) Profiling of experience-regulated proteins in the songbird auditory forebrain using quantitative proteomics. Eur. J. Neurosci. 27: 1409-1422. *Corresponding author.

Pinaud, R* & Terleph, TA (2008) A songbird forebrain area potentially involved in auditory discrimination and memory formation. J. Biosci. 33: 145-155. *Corresponding author.

Tremere, LA, Pinaud, R, Irwin, R & Allen, CN (2008) Post-inhibitory rebound spikes are modulated by the history of membrane hyperpolarization in the SCN. Eur. J. Neurosci. 28: 1127-1135.

Tadin, D* & Pinaud, R* (2008) Visual object recognition: building invariant representations over time. J. Biosci. 33: 639-642. *Corresponding authors.

Tremere, LA & Pinaud, R* (2008) Recovery from amblyopia in adults via decreased visual cortical inhibition caused by experience in an enriched environment. J. Biosci. 33: 157-158. *Corresponding author.

Pinaud, R*, Terleph, TA, Wynne, RD & Tremere, LA (2008) Neural correlates of auditory processing, learning and memory formation in songbirds. Prog. Phys . 173: 270-282 . *Corresponding author.

Pinaud, R, Saldanha, CJ, Wynne, RD, Lovell, PV & Mello, CV (2007) The excitatory thalamo-cortical projection within the song control system of zebra finches is formed by calbindin-expressing neurons. J. Comp. Neurol. 504: 601-618.

Pinaud, R & Mello, CV. (2007) GABA immunoreactivity in auditory and song control brain areas of zebra finches. J. Chem. Neuroanat. 34: 1-21.

Pinaud, R, Fortes, AF, Lovell, PV & Mello, CV (2006) Calbindin-positive neurons reveal a sexual dimorphism within the songbird analogue of the mammalian auditory cortex. J. Neurobiol. 66: 182-195.

Tremere, LA & Pinaud, R. (2006) Disparity for disinhibitory and excitatory effects during cortical reorganization. Int. J. Neurosci. 116: 547-564

Tremere, LA & Pinaud, R. (2005) Incongruent restoration of inhibitory transmission and general metabolic activity during reorganization of somatosensory cortex. Int. J. Neurosci. 115: 1003-1015.

Pinaud, R (2004) Experience-dependent immediate early gene expression in the adult central nervous system: evidence from enriched-environment studies. Int. J. Neurosci. 114: 321-333.

Pinaud, R, Velho, TAF, Jeong, JK, Tremere, LA, Leão, RM, von Gersdorff, H & Mello, CV. (2004) GABAergic neurons participate in the brain’s response to birdsong auditory stimulation. Eur. J. Neurosci. 20: 1318-1330.

Pinaud, R, Vargas, CD, Ribeiro, S, Monteiro, MV, Tremere, LA, Vianney, P, Delgado, P, Mello, CV, Rocha-Miranda, CE & Volchan, E. (2003) Light-induced egr-1 expression in the striate cortex of the opossum. Brain Res. Bull. 61: 139-146.

Pinaud, R, De Weerd P, Currie RW, Fiorani, Jr., M, Hess, FF & Tremere, LA. (2003) NGFI-A immunoreactivity in the primate retina: implications for genetic regulation of plasticity. Int. J. Neurosci. 113: 1275-1285.

Pinaud, R, Tremere, LA, Penner, MR, Hess, FF, Barnes, SA, Robertson, HA & Currie, RW (2002) Plasticity-driven gene expression in the rat retina. Mol. Brain Res. 98: 93-101.

Pinaud, R, Tremere, LA, Penner, MR, Hess, FF, Robertson, HA & Currie, RW (2002). Complexity of sensory environment drives the expression of candidate-plasticity gene, nerve growth factor induced-A. Neuroscience 112: 573-582.

Pinaud, R, Penner, MR, Robertson, HA & Currie, RW (2001). Upregulation of the immediate early gene arc in the brains of rats exposed to environmental enrichment: implications for molecular plasticity. Mol. Brain Res. 91: 50-56.

Pinaud, R, Tremere, LA & Penner, MR (2000) Light-induced zif268 expression is dependent on noradrenergic input in rat visual cortex. Brain Res. 882: 251-255.

SELECTED BOOK CHAPTERS

Pinaud, R* & Jeong, JK (2009) Duplex In-Situ Hybridization in the Study of Gene Co-Regulation in the Vertebrate Brain. In: Histology Protocols. I.A. Darby and T.D. Hewitson (Eds.), Humana Press Inc., Totowa, New Jersey. Chapter 9, pp 115-129. *Corresponding author.

Pinaud, R*, Alzate, O & Tremere, LA (2009) Proteomics of Experience-Dependent Plasticity in the Songbird Auditory Forebrain. In: Neuroproteomics. O. Alzate (Ed.), Frontiers in Neuroscience, CRC Press, Boca Raton, Florida. Chapter 14, pp 267-291. *Corresponding author.

Pinaud, R*, Terleph, TA, Currie, RW & Tremere, LA (2006) Regulation of Immediate Early Genes in the Visual Cortex. In: Immediate Early Genes in Sensory Processing, Cognitive Performance and Neurological Disorders. R. Pinaud and L.A. Tremere (Eds.), Springer-Verlag, New York. Chapter 2, pp 13-33. *Corresponding author.

Mello, CV & Pinaud, R (2006) Immediate Early Gene Regulation in the Auditory System. In: Immediate Early Genes in Sensory Processing, Cognitive Performance and Neurological Disorders. R. Pinaud and L.A. Tremere (Eds.), Springer-Verlag, New York. Chapter 3, pp 35-56.

Pinaud, R* & Tremere, LA. (2005) Experience-Dependent Rewiring of Retinal Circuitry: Involvement of Immediate Early Genes. In: Plasticity in the Visual System: From Genes to Circuits. R. Pinaud, LA Tremere and P. De Weerd (Eds.), Springer-Verlag, New York. Chapter 5, pp 79-95. *Corresponding author.

Pinaud, R*, Terleph, TA & Tremere, LA. (2005) Neuromodulatory Transmitters in Sensory Processing and Plasticity in the Primary Visual Cortex. In: Plasticity in the Visual System: From Genes to Circuits. R. Pinaud, LA Tremere and P. De Weerd (Eds.), Springer-Verlag, New York. Chapter 7, pp 127-151. *Corresponding author.

Pinaud, R* (2005) Critical Calcium-Regulated Biochemical and Gene Expression Programs Involved in Experience-Dependent Plasticity. In: Plasticity in the Visual System: From Genes to Circuits. R. Pinaud, LA Tremere and P. De Weerd (Eds.), Springer-Verlag, New York. Chapter 8, pp 153-180. *Corresponding author.

Tremere, LA & Pinaud, R*. (2005) Intra-Cortical Inhibition in the Regulation of Receptive Field Properties and Neural Plasticity in the Primary Visual Cortex. In: Plasticity in the Visual System: From Genes to Circuits. R. Pinaud, LA Tremere and P. De Weerd (Eds.), Springer-Verlag, New York. Chapter 11, pp 229-243. *Corresponding author.

Mello, CV, Velho, TA & Pinaud, R. (2004) Song-Induced Gene Expression: A Window on Song Auditory Processing and Perception. In: Behavioral Biology of Birdsong. P. Zeigler and P. Marler (Eds.) ANYAS. Chapter 14, pp 263-281.

Tremere, LA, Pinaud, R & De Weerd, P. (2003) Contributions of Inhibitory Mechanisms to Perceptual Completion and Cortical Reorganization. In: Filling-in: From Perceptual Completion to Cortical Reorganization. L. Pessoa and P. De Weerd (Eds.), Oxford University Press. Chapter 15, pp 295-322.